| BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph >::AddEdge(const CMGVertex &u, const CMGVertex &v, const CMGEdge &e) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | protected |
| BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph >::AddVertex(const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | protected |
| BaseGraph() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | inline |
| cereal::access class | CondensedMolecularGraph | friend |
| ComponentContain typedef | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| Condense(const MolecularGraph &) | CondensedMolecularGraph | friend |
| CondensedMolecularGraph()=default | CondensedMolecularGraph | |
| CondensedMolecularGraph(const CondensedMolecularGraph &)=default | CondensedMolecularGraph | |
| CondensedMolecularGraph(CondensedMolecularGraph &&)=default | CondensedMolecularGraph | |
| CycleEdgeContain typedef | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| CycleVertContain typedef | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| Degree(const CMGVertex &v) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| EdgeContain typedef | CondensedMolecularGraph | |
| EdgeIter typedef | CondensedMolecularGraph | |
| EdgeMap typedef | CondensedMolecularGraph | |
| EdgeType typedef | CondensedMolecularGraph | |
| GetCondensedVertex(const MGVertex &v) const | CondensedMolecularGraph | |
| GetConnectedComponents() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetCycles() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetEdge(const MGEdge &e) const | CondensedMolecularGraph | |
| BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph >::GetEdge(const CMGVertex &u, const CMGVertex &v) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetEdges() const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetMolecularGraph() const | CondensedMolecularGraph | |
| GetNeighbours(const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetPredecessors(const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetSourceVertex(const CMGEdge &e) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetSuccessors(const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetSuperGraph() const | CondensedMolecularGraph | |
| GetTargetVertex(const CMGEdge &e) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetVertex(const MGVertex &v) const | CondensedMolecularGraph | |
| GetVertices(const CMGEdge &e) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| GetVertices() const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| graph_type typedef | CondensedMolecularGraph | |
| HasCondensedVertex(const MGVertex &v) const | CondensedMolecularGraph | |
| HasEdge(const MGEdge &e) const | CondensedMolecularGraph | |
| BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph >::HasEdge(const CMGEdge &e) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph >::HasEdge(const CMGVertex &u, const CMGVertex &v) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| HasVertex(const MGVertex &v) const | CondensedMolecularGraph | |
| BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph >::HasVertex(const CMGVertex &v) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| InDegree(const CMGVertex &v) const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| IsConnected() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| IsCyclic(const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| IsCyclic(const CMGVertex &v, uint32_t sz) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| IsCyclic(const CMGEdge &e) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| IsCyclic(const CMGEdge &e, uint32_t sz) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| IsSubgraph() const | CondensedMolecularGraph | |
| m_basedata | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | protected |
| MolecularGraph class | CondensedMolecularGraph | friend |
| NbrsContain typedef | CondensedMolecularGraph | |
| NbrsIter typedef | CondensedMolecularGraph | |
| NumConnectedComponents() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| NumCycles() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| NumEdges() const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| NumVertices() const | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| operator bool() const | CondensedMolecularGraph | inline |
| operator!=(const CondensedMolecularGraph &G) const | CondensedMolecularGraph | inline |
| operator<(const CondensedMolecularGraph &G) const | CondensedMolecularGraph | |
| operator<<(std::ostream &os, const CondensedMolecularGraph &G) | CondensedMolecularGraph | friend |
| operator<=(const CondensedMolecularGraph &G) const | CondensedMolecularGraph | inline |
| operator=(const CondensedMolecularGraph &)=default | CondensedMolecularGraph | |
| operator=(CondensedMolecularGraph &&)=default | CondensedMolecularGraph | |
| operator==(const CondensedMolecularGraph &G) const | CondensedMolecularGraph | |
| operator>(const CondensedMolecularGraph &G) const | CondensedMolecularGraph | |
| operator>=(const CondensedMolecularGraph &G) const | CondensedMolecularGraph | inline |
| PredIter typedef | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| RemoveEdge(const CMGEdge &e) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | protected |
| RemoveEdge(const CMGVertex &u, const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | protected |
| RemoveVertex(const CMGVertex &v) | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | protected |
| Subgraph(std::vector< CMGVertex > &verts) | CondensedMolecularGraph | virtual |
| Subgraph(std::vector< CMGVertex > &verts, std::vector< CMGEdge > &edges) | CondensedMolecularGraph | virtual |
| SubgraphType typedef | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| VertContain typedef | CondensedMolecularGraph | |
| VertexType typedef | CondensedMolecularGraph | |
| VertIter typedef | CondensedMolecularGraph | |
| VertMap typedef | CondensedMolecularGraph | |
| VertType typedef | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | |
| ~ CondensedMolecularGraph()=default | CondensedMolecularGraph | |
| ~BaseGraph() | BaseGraph< CMGVertex, CMGEdge, CondensedMolecularGraph > | inlinevirtual |